Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
223
gene expression
150
accessible chromatin
113
target gene predictions
94
candidate regulatory elements
89
differential activity
46
chromatin state
39
variant allelic effects
30
binding sites
14
histone modifications
2
caQTL
1
eQTL
Date released
163
February, 2021
155
September, 2023
130
September, 2022
126
November, 2021
60
February, 2024
36
March, 2023
August, 2021
20
January, 2021
16
May, 2021
15
June, 2020
13
January, 2020
13
May, 2020
10
May, 2024
8
February, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
March, 2020
5
October, 2019
3
August, 2017
2
May, 2022
1
February, 2023
1
July, 2020
Available data
440
bed bed3+
293
tsv
142
bigWig
66
txt
43
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
801
Homo sapiens
Biosample type
801
primary cell
61
tissue
43
cell line
26
in vitro differentiated cells
Organ
806
epithelium
290
connective tissue
289
kidney
172
vasculature
126
pancreas
114
blood vessel
100
skin of body
62
liver
50
musculature of body
46
mammary gland
41
penis
extraembryonic component
35
brain
34
lung
33
heart
29
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
493
AMP
155
KPMP
126
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
485
hg19
223
GRCh38
month_released!
August, 2021
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
801 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
caQTL
eQTL
primary cell
endothelial cell
6
14
7
3
2
2
1
2
1
hepatocyte
13
8
3
2
1
2
1
1
epithelial cell of proximal tubule
15
1
1
2
1
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
glomerular endothelial cell
13
2
1
2
1
1
+ See 134 more…
See all biosamples
Download