Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
476
accessible chromatin
462
gene expression
368
target gene predictions
361
candidate regulatory elements
209
histone modifications
194
chromatin state
152
differential activity
98
binding sites
80
variant allelic effects
11
caQTL
11
eQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
478
September, 2022
451
February, 2021
329
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
41
May, 2024
40
May, 2022
January, 2022
30
October, 2022
22
January, 2020
19
April, 2020
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1612
bed bed3+
591
tsv
404
bigWig
161
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2389
Homo sapiens
Biosample type
2480
tissue
2434
primary cell
2332
cell line
461
in vitro differentiated cells
4
stem cell
Organ
821
epithelium
302
kidney
283
connective tissue
170
vasculature
126
pancreas
112
blood vessel
100
skin of body
65
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
29
heart
27
artery
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
mouth
4
small intestine
4
spinal cord
3
gonad
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1744
AMP
329
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1817
hg19
702
GRCh38
month_released!
February, 2020
January, 2022
organ_slims!
eye
BIOSAMPLE
TYPE
2434 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
caQTL
eQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
1
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
17
8
endothelial cell
15
9
7
3
1
2
2
2
1
+ See 435 more…
See all biosamples
Download