Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
467
accessible chromatin
453
gene expression
366
target gene predictions
363
candidate regulatory elements
207
histone modifications
194
chromatin state
152
differential activity
95
binding sites
78
variant allelic effects
44
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
447
February, 2021
322
November, 2021
281
September, 2023
256
May, 2021
138
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
41
May, 2024
37
January, 2022
37
May, 2022
28
October, 2022
22
January, 2020
19
April, 2020
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
6
October, 2019
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1592
bed bed3+
591
tsv
398
bigWig
161
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
2395
Homo sapiens
Biosample type
2440
primary cell
2328
cell line
2208
tissue
458
in vitro differentiated cells
2
stem cell
Organ
816
epithelium
302
kidney
286
connective tissue
169
vasculature
126
pancreas
111
blood vessel
100
skin of body
61
liver
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
29
heart
27
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
19
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
limb
1
testis
1
thymus
Project
1757
AMP
322
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1792
hg19
731
GRCh38
month_released!
February, 2020
March, 2020
organ_slims!
musculature of body
BIOSAMPLE
TYPE
2440 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
17
8
endothelial cell
15
9
7
3
1
2
2
1
2
+ See 437 more…
See all biosamples
Download