Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
473
gene expression
469
accessible chromatin
356
target gene predictions
350
candidate regulatory elements
209
histone modifications
189
chromatin state
152
differential activity
96
binding sites
80
variant allelic effects
46
eQTL
7
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
466
September, 2022
445
February, 2021
314
November, 2021
281
September, 2023
254
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
39
May, 2024
37
January, 2022
29
October, 2022
23
January, 2020
16
April, 2020
12
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
5
March, 2020
February, 2023
3
November, 2020
July, 2020
1
June, 2021
1
March, 2024
Available data
1575
bed bed3+
590
tsv
395
bigWig
157
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2394
Homo sapiens
Biosample type
2439
primary cell
2246
cell line
2233
tissue
469
in vitro differentiated cells
4
stem cell
Organ
827
epithelium
309
kidney
290
connective tissue
170
vasculature
126
pancreas
112
blood vessel
100
skin of body
64
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
lung
heart
28
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1767
AMP
314
ENCODE
281
KPMP
59
T1D
16
LungMap
2
community
Genome assembly (visualization)
1780
hg19
714
GRCh38
month_released!
February, 2023
July, 2020
organ_slims!
heart
lung
BIOSAMPLE
TYPE
2439 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
17
8
endothelial cell
9
15
7
3
1
2
2
1
1
+ See 435 more…
See all biosamples
Download