Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
57
candidate regulatory elements
45
target gene predictions
29
gene expression
27
chromatin state
21
binding sites
12
differential activity
12
histone modifications
11
variant allelic effects
3
eQTL
2
caQTL
Date released
75
September, 2022
56
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
12
October, 2022
11
June, 2020
10
May, 2024
7
March, 2023
May, 2021
5
February, 2020
5
January, 2020
5
May, 2020
3
April, 2020
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
211
bed bed3+
46
bigWig
35
tsv
26
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
281
Homo sapiens
Biosample type
281
primary cell
89
tissue
44
in vitro differentiated cells
31
cell line
1
stem cell
Organ
813
epithelium
309
kidney
281
connective tissue
170
vasculature
114
pancreas
112
blood vessel
96
skin of body
64
liver
50
musculature of body
45
mammary gland
40
penis
39
extraembryonic component
35
brain
33
lung
32
heart
28
artery
23
eye
23
intestine
21
embryo
20
lymphatic vessel
19
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
9
blood
9
bodily fluid
9
prostate gland
6
large intestine
5
trachea
5
uterus
4
mouth
4
small intestine
4
spinal cord
3
gonad
3
thyroid gland
2
ovary
1
adipose tissue
1
pericardium
1
thymus
Project
209
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
238
hg19
95
GRCh38
month_released!
January, 2022
May, 2021
BIOSAMPLE
TYPE
281 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
3
4
1
6
pericyte cell
10
3
10
1
osteoblast
5
2
1
2
1
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
1
6
1
1
4
2
+ See 41 more…
See all biosamples
Download