Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
386
accessible chromatin
372
target gene predictions
367
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
80
variant allelic effects
77
binding sites
46
eQTL
5
hQTL
4
caQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
56
January, 2021
55
March, 2023
June, 2020
42
August, 2021
41
May, 2020
41
May, 2024
40
May, 2022
37
January, 2022
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1506
bed bed3+
591
tsv
366
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2381
Homo sapiens
Biosample type
2587
tissue
2381
primary cell
2130
cell line
449
in vitro differentiated cells
4
stem cell
Organ
808
epithelium
303
kidney
268
connective tissue
165
vasculature
125
pancreas
109
blood vessel
95
skin of body
63
liver
47
musculature of body
42
mammary gland
38
penis
36
extraembryonic component
33
heart
32
brain
32
lung
26
artery
23
intestine
20
embryo
20
eye
20
lymphatic vessel
18
vein
15
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
prostate gland
8
blood
8
bodily fluid
8
placenta
6
large intestine
4
mouth
4
small intestine
4
spinal cord
4
trachea
4
uterus
3
gonad
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1689
AMP
333
ENCODE
281
KPMP
57
T1D
19
LungMap
2
community
Genome assembly (visualization)
1716
hg19
744
GRCh38
month_released!
June, 2020
October, 2022
BIOSAMPLE
TYPE
2381 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
hQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
15
14
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
2
5
7
30
1
B cell
2
4
10
17
8
endothelial cell
9
15
7
3
1
2
2
1
1
+ See 444 more…
See all biosamples
Download