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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1118
target gene predictions
766
accessible chromatin
478
gene expression
472
differential activity
366
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
81
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
487
September, 2022
456
February, 2021
333
November, 2021
320
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2686
bed bed3+
612
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3835
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
393
HDMA
376
DGA
373
AMP
359
T2DKP
330
T1D
320
pyxis
281
KPMP
211
BLUEPRINT
208
ENCODE
163
ChIP-Atlas
133
CATlas
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5888
tissue
3880
primary cell
2407
cell line
493
in vitro differentiated cells
4
stem cell
Organ
807
epithelium
465
blood
330
kidney
327
connective tissue
230
brain
205
heart
169
skin of body
166
vasculature
149
pancreas
133
liver
120
blood vessel
78
lung
66
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
48
mammary gland
46
muscle organ
40
extraembryonic component
40
penis
36
thymus
35
artery
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
20
embryo
19
vein
18
bone element
17
lymphatic vessel
15
bronchus
13
bone marrow
11
esophagus
11
prostate gland
11
stomach
10
placenta
8
bodily fluid
6
large intestine
5
skeleton
4
mouth
4
small intestine
4
spinal cord
4
trachea
4
uterus
3
gonad
2
ovary
1
limb
1
pericardium
1
testis
Project
3184
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1826
GRCh38
1789
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
month_released!
June, 2020
BIOSAMPLE
TYPE
3880 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
16
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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