Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
57
candidate regulatory elements
49
target gene predictions
30
gene expression
27
chromatin state
21
binding sites
12
differential activity
12
histone modifications
7
variant allelic effects
6
eQTL
2
caQTL
Date released
75
September, 2022
56
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
12
October, 2022
11
June, 2020
10
May, 2024
7
March, 2023
7
May, 2021
5
January, 2020
May, 2020
4
February, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
212
bed bed3+
46
bigWig
37
tsv
26
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
285
Homo sapiens
Biosample type
285
primary cell
92
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
816
epithelium
303
kidney
286
connective tissue
164
vasculature
126
pancreas
110
blood vessel
100
skin of body
62
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
34
lung
33
heart
29
artery
28
brain
23
intestine
22
embryo
22
eye
20
lymphatic vessel
18
vein
16
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
pericardium
1
testis
1
thymus
Project
213
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
239
hg19
98
GRCh38
month_released!
May, 2020
organ_slims!
pericardium
BIOSAMPLE
TYPE
285 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
3
4
1
6
2
pericyte cell
10
3
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 43 more…
See all biosamples
Download