Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
accessible chromatin
32
differential activity
29
gene expression
27
target gene predictions
7
variant allelic effects
6
binding sites
6
histone modifications
4
candidate regulatory elements
2
chromatin state
1
caQTL
Date released
39
March, 2023
20
January, 2021
18
November, 2021
15
February, 2021
13
May, 2021
13
September, 2022
12
February, 2024
7
August, 2018
5
October, 2019
5
September, 2023
3
June, 2020
2
February, 2020
1
February, 2023
1
June, 2021
1
October, 2022
Available data
90
bed bed3+
52
tsv
42
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bed bed9
Organism
155
Homo sapiens
Biosample type
155
primary cell
153
tissue
37
cell line
3
in vitro differentiated cells
Organ
829
epithelium
309
kidney
291
connective tissue
172
vasculature
126
pancreas
114
blood vessel
100
skin of body
65
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
33
heart
29
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
112
AMP
20
T1D
18
ENCODE
5
KPMP
Genome assembly (visualization)
93
hg19
27
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
155 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
target gene predictions
variant allelic effects
binding sites
histone modifications
candidate regulatory elements
chromatin state
caQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
+ See 18 more…
See all biosamples
Download