Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
483
accessible chromatin
364
target gene predictions
344
candidate regulatory elements
307
gene expression
208
histone modifications
190
chromatin state
96
binding sites
81
variant allelic effects
46
eQTL
42
differential activity
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
466
September, 2022
436
February, 2021
333
November, 2021
September, 2023
255
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
42
August, 2021
41
May, 2024
40
May, 2022
37
January, 2022
29
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1596
bed bed3+
410
bigWig
310
tsv
157
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2139
Homo sapiens
Biosample type
2614
tissue
2334
cell line
2184
primary cell
460
in vitro differentiated cells
3
stem cell
Organ
674
epithelium
276
connective tissue
169
kidney
137
vasculature
126
pancreas
100
skin of body
94
blood vessel
65
liver
50
musculature of body
46
mammary gland
penis
40
extraembryonic component
35
brain
34
lung
33
heart
24
artery
23
eye
23
intestine
22
embryo
20
vein
16
bronchus
15
lymphatic vessel
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1771
AMP
333
ENCODE
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1797
hg19
739
GRCh38
month_released!
September, 2023
organ_slims!
penis
spinal cord
BIOSAMPLE
TYPE
2184 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
differential activity
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
3
30
1
B cell
6
10
17
2
8
endothelial cell
15
7
3
9
1
2
2
1
2
+ See 389 more…
See all biosamples
Download