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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
7
ATAC-seq
7
ChIP-seq
2
DNase-seq
2
total RNA-seq
Assay category
45
Transcription
9
DNA accessibility
7
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
narrow histone mark
1
control
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
31
July, 2019
13
October, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2023
1
November, 2018
Available data
59
bam
56
bigWig
45
tsv
43
fastq
13
bed narrowPeak
5
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
254
tissue
61
primary cell
30
cell line
8
in vitro differentiated cells
Organ
71
epithelium
38
pancreas
21
blood vessel
21
vasculature
vein
11
kidney
2
connective tissue
1
liver
Project
61
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
61
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
61 results
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single cell RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
primary cell
epithelial cell of proximal tubule
7
pancreatic acinar cell
6
1
pancreatic delta cell
7
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
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