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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
8
RRBS
2
small RNA-seq
1
Hi-C
Assay category
17
Transcription
8
DNA methylation
1
3D chromatin structure
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
50
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
24
July, 2019
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
0
April, 2020
Available data
18
bigWig
17
bam
17
tsv
8
bed bedMethyl
8
bigBed bedMethyl
2
fastq
1
bed bed3+
1
hdf5
Organism
26
Homo sapiens
Biosample type
159
tissue
26
primary cell
Organ
15
epithelium
8
connective tissue
brain
7
kidney
5
heart
5
vasculature
4
blood vessel
3
musculature of body
2
adipose tissue
2
artery
2
liver
2
pancreas
1
eye
1
pericardium
Project
26
AMP
Genome assembly (visualization)
26
hg19
17
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
26 results
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total RNA-seq
RRBS
small RNA-seq
Hi-C
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
mesenchymal stem cell of adipose
1
1
pancreatic acinar cell
2
renal cortical epithelial cell
1
1
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