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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
5
total RNA-seq
1
Hi-C
Assay category
60
DNA accessibility
41
DNA methylation
38
Transcription
1
3D chromatin structure
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
134
zippedFastqFolder
5
bam
5
bigWig
5
tsv
1
hic
Organism
140
Homo sapiens
Biosample type
140
primary cell
69
tissue
2
cell line
2
in vitro differentiated cells
2
stem cell
Organ
85
epithelium
80
pancreas
5
liver
Project
134
HPAP
5
AMP
1
ITG
Genome assembly (visualization)
6
GRCh38
5
hg19
Lab
134
Klaus Kaestner, Upenn
5
AMP-T2D consortium
1
ITG
BIOSAMPLE
ASSAY
140 results
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WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
total RNA-seq
Hi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
hepatocyte
5
pancreatic acinar cell
4
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