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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
2
Hi-C
Assay category
56
Transcription
3
DNA accessibility
2
3D chromatin structure
Date released
147
May, 2020
140
May, 2021
134
May, 2022
88
February, 2023
59
September, 2020
56
September, 2018
48
February, 2021
48
July, 2018
47
June, 2019
43
April, 2018
43
August, 2017
31
July, 2019
22
October, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
August, 2021
3
June, 2018
3
May, 2019
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
41
fastq
19
zippedFastqFolder
3
bigWig
2
hic
1
bedpe bed3+
Organism
61
Homo sapiens
Biosample type
61
primary cell
40
tissue
13
cell line
8
in vitro differentiated cells
6
stem cell
Organ
20
epithelium
19
pancreas
1
blood vessel
1
vasculature
1
vein
Project
59
HPAP
1
AMP
1
ITG
Genome assembly (visualization)
4
GRCh38
1
hg19
Lab
59
Klaus Kaestner, Upenn
1
AMP-T2D consortium
1
ITG
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
61 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
chondrocytes
1
endothelial cell of umbilical vein
1
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