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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
4
ChIP-seq
Assay category
60
DNA accessibility
41
DNA methylation
33
Transcription
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
control
1
narrow histone mark
1
transcription factor
Date released
203
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
47
June, 2019
46
August, 2017
43
April, 2018
31
October, 2019
28
July, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
134
zippedFastqFolder
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
Organism
138
Homo sapiens
Biosample type
159
tissue
138
primary cell
Organ
84
epithelium
80
pancreas
4
kidney
Project
134
HPAP
4
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
134
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
138 results
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Clear Filters
WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
ChIP-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
kidney epithelial cell
4
pancreatic acinar cell
4
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