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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
113
ATAC-seq
102
total RNA-seq
16
pCHi-C
1
DNAme array
1
single cell RNA-seq
Assay category
121
DNA binding
113
DNA accessibility
103
Transcription
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
261
bigWig
239
bam
127
bed narrowPeak
97
tsv
84
tagAlign
2
bed bed3+
1
csv
1
fastq
Organism
354
Homo sapiens
Biosample type
354
primary cell
259
tissue
132
in vitro differentiated cells
83
cell line
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
196
T1D
158
AMP
Genome assembly (visualization)
274
hg19
194
GRCh38
Lab
231
Kyle Gaulton, UCSD
123
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
354 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
DNAme array
single cell RNA-seq
primary cell
monocyte
85
15
54
1
1
CD8-positive, alpha-beta T cell
33
2
4
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
22
1
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
1
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