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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
63
total RNA-seq
40
single cell RNA-seq
Assay category
103
DNA accessibility
103
Transcription
Date released
206
May, 2021
147
May, 2020
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
29
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
93
bigWig
90
bam
45
tsv
41
fastq
19
zippedFastqFolder
Organism
206
Homo sapiens
Biosample type
206
primary cell
193
tissue
1
cell line
Organ
19
epithelium
19
pancreas
Project
102
AMP
59
HPAP
45
T1D
Genome assembly (visualization)
90
hg19
48
GRCh38
Lab
102
AMP-T2D consortium
59
Klaus Kaestner, Upenn
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
month_released!
May, 2022
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
206 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
primary cell
Langerhans cell
40
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
pancreatic alpha cell
2
15
macrophage
11
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