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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
55
total RNA-seq
18
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
118
DNA binding
55
Transcription
18
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
control
Date released
203
May, 2021
147
May, 2020
134
May, 2022
February, 2023
73
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
47
June, 2019
46
August, 2017
43
April, 2018
31
October, 2019
28
July, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
173
bigWig
154
bam
132
bed narrowPeak
84
tagAlign
52
tsv
5
bigBed narrowPeak
5
fastq
2
bed bed3+
Organism
208
Homo sapiens
Biosample type
208
primary cell
126
in vitro differentiated cells
40
tissue
21
cell line
Organ
5
epithelium
5
pancreas
1
bone element
1
bone marrow
1
connective tissue
Project
151
T1D
57
AMP
Genome assembly (visualization)
186
hg19
154
GRCh38
Lab
183
Kyle Gaulton, UCSD
25
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2023
target.investigated_as!
control
BIOSAMPLE
ASSAY
208 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
52
13
1
1
CD8-positive, alpha-beta T cell
30
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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