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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
20
total RNA-seq
4
ATAC-seq
1
DNase-seq
Assay category
60
Transcription
5
DNA accessibility
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
41
fastq
19
zippedFastqFolder
8
bigWig
6
bam
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
65
Homo sapiens
Biosample type
65
primary cell
6
cell line
4
tissue
Organ
19
epithelium
19
pancreas
6
connective tissue
Project
59
HPAP
6
AMP
Genome assembly (visualization)
9
GRCh38
6
hg19
Lab
59
Klaus Kaestner, Upenn
6
AMP-T2D consortium
month_released!
May, 2019
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
65 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
DNase-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
osteoblast
4
1
1
pancreatic beta cell
1
1
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