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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
4
DNase-seq
2
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
21
DNA binding
6
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
control
Date released
80
May, 2022
61
September, 2018
37
February, 2023
33
April, 2018
33
July, 2018
30
October, 2019
19
September, 2020
18
June, 2019
17
August, 2017
13
July, 2019
7
August, 2020
6
February, 2021
5
December, 2019
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2018
3
August, 2021
3
October, 2022
2
October, 2018
1
June, 2018
1
March, 2020
Available data
27
bam
23
bigWig
20
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
30
Homo sapiens
Biosample type
30
primary cell
2
cell line
Organ
30
epithelium
19
blood vessel
19
vasculature
19
vein
10
kidney
1
liver
Project
30
AMP
Genome assembly (visualization)
25
hg19
21
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
month_released!
January, 2021
target.investigated_as!
control
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
15
2
1
1
epithelial cell of proximal tubule
6
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Liver fetal (hepatocyte)
1
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