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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 24ChIP-seq
  • 4DNase-seq
  • 2ATAC-seq
  • 2total RNA-seq
  • 1FAIRE-seq
  • 1Hi-C
Assay category
  • 24DNA binding
  • 7DNA accessibility
  • 2Transcription
  • 13D chromatin structure
Target of assay
  • 21histone
  • 21histone modification
  • 12broad histone mark
  • 9narrow histone mark
  • 3control
Date released
  • 206May, 2021
  • 147May, 2020
  • 134May, 2022
  • 88February, 2023
  • 73September, 2018
  • 59August, 2017
  • 59September, 2020
  • 55June, 2019
  • 48February, 2021
  • 48July, 2018
  • 43April, 2018
  • 34October, 2019
  • 31July, 2019
  • 9November, 2017
  • 8January, 2021
  • 7August, 2020
  • 6November, 2020
  • 5December, 2019
  • 5May, 2019
  • 5September, 2017
  • 4August, 2021
  • 3August, 2018
  • 3June, 2018
  • 3October, 2022
  • 2October, 2018
  • 1March, 2020
  • 1March, 2023
  • 1November, 2018
Available data
  • 31bam
  • 23bigWig
  • 21bed narrowPeak
  • 13bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2bed bed3+
  • 2tsv
  • 1hic
  • 1tar
Organism
  • 34Homo sapiens
Biosample type
  • 242tissue
  • 34primary cell
  • 30cell line
  • 8in vitro differentiated cells
Organ
  • 33epithelium
  • 21blood vessel
  • 21vasculature
  • 21vein
  • 11kidney
  • 1liver
Project
  • 34AMP
Genome assembly (visualization)
  • 26hg19
  • 22GRCh38
Lab
  • 34AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
  • 1audit script error
BIOSAMPLE
ASSAY

34 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein17211
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
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