Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1087
target gene predictions
659
accessible chromatin
478
gene expression
454
differential activity
357
candidate regulatory elements
210
histone modifications
193
chromatin state
98
binding sites
74
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
891
July, 2026
475
September, 2022
451
February, 2021
333
November, 2021
302
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
79
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
29
October, 2022
19
April, 2020
16
February, 2020
15
January, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2529
bed bed3+
612
tsv
402
bigWig
160
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3657
Homo sapiens
Collection Tags
534
ENCODE-rE2G
468
EpiMap
373
AMP
369
DGA
359
T2DKP
357
HDMA
330
T1D
302
pyxis
281
KPMP
215
ChIP-Atlas
211
BLUEPRINT
201
ENCODE
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5382
tissue
3702
primary cell
2469
cell line
502
in vitro differentiated cells
3
stem cell
Organ
822
epithelium
466
blood
338
connective tissue
335
kidney
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3006
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1806
hg19
1636
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
brain
BIOSAMPLE
TYPE
3702 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
15
22
9
23
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
T-cell
64
4
+ See 522 more…
See all biosamples
Download