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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1068
target gene predictions
756
accessible chromatin
447
gene expression
409
differential activity
317
candidate regulatory elements
198
histone modifications
170
chromatin state
79
binding sites
70
variant allelic effects
49
eQTL
20
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1069
July, 2026
412
September, 2022
400
February, 2021
283
November, 2021
269
May, 2026
266
September, 2023
249
May, 2021
139
February, 2024
81
May, 2020
54
January, 2021
48
March, 2023
42
June, 2020
41
August, 2021
38
May, 2024
37
May, 2022
34
January, 2022
31
July, 2025
19
October, 2022
18
January, 2020
16
April, 2020
11
February, 2020
9
November, 2022
8
August, 2018
6
October, 2019
5
August, 2017
5
March, 2020
3
February, 2023
1
July, 2020
1
March, 2024
Available data
2527
bed bed3+
574
tsv
364
bigWig
138
bed bed9
101
txt
27
bed bed9+
15
bigBed narrowPeak
11
bed bed3
11
bed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
3550
Homo sapiens
Collection Tags
543
ENCODE-rE2G
405
EpiMap
393
HDMA
337
DGA
324
T1D
319
AMP
307
T2DKP
269
pyxis
266
KPMP
210
BLUEPRINT
183
ChIP-Atlas
166
ENCODE
133
CATlas
71
T2DKP
48
HPAP
41
T2D
32
eQTLCatalogue
26
FNIH_projects-heart
13
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5855
tissue
3595
primary cell
2528
cell line
462
in vitro differentiated cells
3
stem cell
Organ
822
epithelium
466
blood
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
2973
AMP
283
ENCODE
266
KPMP
57
T1D
16
LungMap
Genome assembly (visualization)
1735
GRCh38
1606
hg19
Encyclopedia version
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
connective tissue
BIOSAMPLE
TYPE
3595 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
2
18
15
86
1
4
2
1
1
endothelial cell
17
24
9
20
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
T-cell
64
4
common myeloid progenitor, CD34-positive
26
27
13
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