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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1004
target gene predictions
659
accessible chromatin
383
differential activity
280
candidate regulatory elements
243
gene expression
193
histone modifications
150
chromatin state
70
binding sites
53
eQTL
42
variant allelic effects
20
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
354
September, 2022
320
May, 2026
292
February, 2021
240
May, 2021
206
November, 2021
126
September, 2023
92
February, 2024
73
May, 2020
40
May, 2024
38
June, 2020
38
May, 2022
37
January, 2022
36
January, 2021
30
July, 2025
25
October, 2022
19
August, 2021
19
March, 2023
12
April, 2020
10
January, 2020
9
November, 2022
8
February, 2020
3
August, 2017
3
August, 2018
3
February, 2023
3
November, 2020
2
January, 2025
2
October, 2019
1
June, 2021
1
March, 2024
Available data
2293
bed bed3+
305
tsv
259
bigWig
120
bed bed9
30
txt
27
bed bed9+
11
bed bed3
11
bed narrowPeak
2
bigBed bed9
2
bigBed narrowPeak
2
csv
Organism
3066
Homo sapiens
Collection Tags
543
ENCODE-rE2G
393
HDMA
354
EpiMap
320
pyxis
310
T1D
222
AMP
212
T2DKP
211
BLUEPRINT
179
DGA
169
ChIP-Atlas
153
ENCODE
133
CATlas
126
KPMP
46
T2DKP
41
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
19
HPAP
14
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5890
tissue
3111
primary cell
2516
cell line
488
in vitro differentiated cells
4
stem cell
Organ
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
2724
AMP
206
ENCODE
126
KPMP
39
T1D
12
LungMap
4
community
Genome assembly (visualization)
1607
GRCh38
1350
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
epithelium
BIOSAMPLE
TYPE
3111 results
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target gene predictions
accessible chromatin
differential activity
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
eQTL
variant allelic effects
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
4
15
86
1
4
2
1
1
fibroblast
28
40
10
3
1
2
6
CD8-positive, alpha-beta T cell
27
4
7
3
30
1
macrophage
13
22
17
3
2
8
3
2
T-cell
64
4
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