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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1100
target gene predictions
796
accessible chromatin
399
differential activity
350
candidate regulatory elements
289
gene expression
210
histone modifications
188
chromatin state
99
binding sites
75
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1060
July, 2026
460
September, 2022
363
February, 2021
330
November, 2021
303
May, 2026
256
May, 2021
152
February, 2024
141
September, 2023
80
May, 2020
56
January, 2021
55
March, 2023
48
June, 2020
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
30
October, 2022
22
August, 2021
19
April, 2020
16
January, 2020
9
August, 2018
9
February, 2020
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2677
bed bed3+
392
bigWig
374
tsv
155
bed bed9
27
bed bed9+
21
txt
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3553
Homo sapiens
Collection Tags
534
ENCODE-rE2G
453
EpiMap
393
HDMA
370
AMP
356
T2DKP
330
T1D
303
pyxis
261
DGA
211
BLUEPRINT
211
ChIP-Atlas
196
ENCODE
141
KPMP
133
CATlas
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5580
tissue
3598
primary cell
2511
cell line
512
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
338
connective tissue
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3045
AMP
330
ENCODE
141
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1798
GRCh38
1780
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
kidney
BIOSAMPLE
TYPE
3598 results
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target gene predictions
accessible chromatin
differential activity
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
4
15
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
23
3
9
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
7
3
30
1
macrophage
13
22
17
3
2
3
8
2
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