Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1094
target gene predictions
782
accessible chromatin
454
gene expression
418
differential activity
366
candidate regulatory elements
207
histone modifications
197
chromatin state
99
binding sites
74
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
483
September, 2022
449
February, 2021
315
November, 2021
296
May, 2026
281
September, 2023
244
May, 2021
140
February, 2024
86
May, 2020
52
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
36
January, 2021
33
July, 2025
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
16
March, 2023
9
November, 2022
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
August, 2018
2
January, 2025
2
October, 2019
1
July, 2020
1
March, 2024
Available data
2668
bed bed3+
565
tsv
370
bigWig
164
bed bed9
108
txt
27
bed bed9+
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
2
bigBed narrowPeak
2
csv
Organism
3738
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
393
HDMA
359
DGA
347
AMP
325
T2DKP
310
T1D
296
pyxis
281
KPMP
211
BLUEPRINT
211
ChIP-Atlas
208
ENCODE
133
CATlas
51
T2DKP
42
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
16
HPAP
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5825
tissue
3783
primary cell
2522
cell line
508
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3125
AMP
315
ENCODE
281
KPMP
39
T1D
19
LungMap
4
community
Genome assembly (visualization)
1803
GRCh38
1769
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
pancreas
BIOSAMPLE
TYPE
3783 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
+ See 545 more…
See all biosamples
Download