Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1100
target gene predictions
794
accessible chromatin
455
differential activity
448
gene expression
334
candidate regulatory elements
207
histone modifications
180
chromatin state
84
binding sites
72
variant allelic effects
55
eQTL
21
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
442
September, 2022
428
February, 2021
327
November, 2021
320
May, 2026
254
May, 2021
246
September, 2023
136
February, 2024
78
May, 2020
56
January, 2021
51
March, 2023
50
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
27
October, 2022
16
April, 2020
14
February, 2020
14
January, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2634
bed bed3+
567
tsv
388
bigWig
148
bed bed9
106
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
2
csv
Organism
3719
Homo sapiens
Collection Tags
543
ENCODE-rE2G
438
EpiMap
393
HDMA
364
AMP
353
T2DKP
347
DGA
330
T1D
320
pyxis
246
KPMP
211
BLUEPRINT
205
ChIP-Atlas
184
ENCODE
133
CATlas
81
T2DKP
51
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
13
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
3764
primary cell
3231
tissue
2548
cell line
512
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3112
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
4
community
Genome assembly (visualization)
1779
GRCh38
1723
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
organ_slims!
vasculature
BIOSAMPLE
TYPE
3764 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
differential activity
gene expression
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
4
15
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
25
9
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
17
2
3
3
8
2
+ See 544 more…
See all biosamples
Download