Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
gene expression
56
differential activity
34
accessible chromatin
29
candidate regulatory elements
24
target gene predictions
17
chromatin state
8
binding sites
8
variant allelic effects
1
histone modifications
Date released
140
September, 2023
105
February, 2021
48
September, 2022
20
August, 2021
19
November, 2021
7
February, 2020
7
January, 2020
7
June, 2020
6
May, 2020
3
October, 2022
2
February, 2024
1
August, 2017
1
May, 2021
Available data
238
tsv
102
bed bed3+
87
txt
27
bigWig
16
bed bed9
Organism
366
Homo sapiens
Biosample type
366
primary cell
365
tissue
77
cell line
4
in vitro differentiated cells
Organ
829
epithelium
309
kidney
291
connective tissue
172
vasculature
pancreas
114
blood vessel
100
skin of body
65
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
33
heart
29
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
207
AMP
140
KPMP
19
ENCODE
Genome assembly (visualization)
118
hg19
42
GRCh38
organ_slims!
pancreas
BIOSAMPLE
TYPE
366 results
search-icon
table-tab-icon
Clear Filters
gene expression
differential activity
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
primary cell
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
mammary gland epithelial cell
1
3
4
3
1
1
glomerular visceral epithelial cell
5
2
2
1
1
kidney tubule cell
1
2
3
2
2
+ See 72 more…
See all biosamples
Download