Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
39
accessible chromatin
30
differential activity
27
target gene predictions
24
gene expression
7
variant allelic effects
5
histone modifications
3
binding sites
2
candidate regulatory elements
2
chromatin state
Date released
39
March, 2023
22
January, 2021
19
November, 2021
12
February, 2021
12
February, 2024
12
May, 2021
7
August, 2018
7
September, 2022
5
October, 2019
1
June, 2020
1
June, 2021
1
May, 2020
1
May, 2022
Available data
81
bed bed3+
47
tsv
42
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
1
bed bed9
1
bed bed9+
Organism
139
Homo sapiens
Biosample type
139
primary cell
114
tissue
34
cell line
3
in vitro differentiated cells
Organ
829
epithelium
309
kidney
291
connective tissue
172
vasculature
126
pancreas
114
blood vessel
100
skin of body
65
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
33
heart
29
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
98
AMP
22
T1D
19
ENCODE
Genome assembly (visualization)
85
hg19
25
GRCh38
organ_slims!
large intestine
BIOSAMPLE
TYPE
139 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
target gene predictions
gene expression
variant allelic effects
histone modifications
binding sites
candidate regulatory elements
chromatin state
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 17 more…
See all biosamples
Download