Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
47
accessible chromatin
33
target gene predictions
30
differential activity
24
gene expression
10
variant allelic effects
4
candidate regulatory elements
4
histone modifications
3
binding sites
2
chromatin state
Date released
39
March, 2023
33
November, 2021
20
January, 2021
15
February, 2024
12
February, 2021
12
May, 2021
10
September, 2022
7
August, 2018
5
October, 2019
2
June, 2020
1
April, 2020
1
June, 2021
Available data
99
bed bed3+
49
bigWig
47
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bed bed9
Organism
157
Homo sapiens
Biosample type
302
tissue
157
primary cell
34
cell line
3
in vitro differentiated cells
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
103
AMP
33
ENCODE
20
T1D
1
LungMap
Genome assembly (visualization)
103
hg19
40
GRCh38
BIOSAMPLE
TYPE
157 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
differential activity
gene expression
variant allelic effects
candidate regulatory elements
histone modifications
binding sites
chromatin state
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 22 more…
See all biosamples
Download