Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 235gene expression
  • 160accessible chromatin
  • 114target gene predictions
  • 89differential activity
  • 86candidate regulatory elements
  • 47chromatin state
  • 39variant allelic effects
  • 30binding sites
  • 17histone modifications
  • 3caQTL
  • 2eQTL
Date released
  • 164February, 2021
  • 155September, 2023
  • 133September, 2022
  • 127November, 2021
  • 60February, 2024
  • 36March, 2023
  • 23August, 2021
  • 20January, 2021
  • 16May, 2021
  • 15June, 2020
  • 13January, 2020
  • 13May, 2020
  • 8February, 2020
  • 7April, 2020
  • 6August, 2018
  • 6October, 2022
  • 5March, 2020
  • 5October, 2019
  • 3August, 2017
  • 3July, 2025
  • 2May, 2022
  • 1February, 2023
  • 1July, 2020
Available data
  • 445bed bed3+
  • 307tsv
  • 151bigWig
  • 78txt
  • 44bed bed9
  • 14bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
Organism
  • 822Homo sapiens
Collection Tags
  • 197DGA
  • 155KPMP
  • 151AMP
  • 147T2DKP
  • 126EpiMap
  • 55ENCODE
  • 47ChIP-Atlas
  • 36HPAP
  • 35 T2DKP
  • 20T1D
  • 4T2D
  • 1CMDGA
Biosample type
  • 822primary cell
  • 61tissue
  • 43cell line
  • 26in vitro differentiated cells
Organ
  • 822epithelium
  • 466blood
  • 338connective tissue
  • 335kidney
  • 231brain
  • 205heart
  • 171skin of body
  • 169vasculature
  • 150pancreas
  • 135liver
  • 123blood vessel
  • 78lung
  • 68eye
  • 62musculature of body
  • 60__MARKER__
  • 52adipose tissue
  • 50mammary gland
  • 46muscle organ
  • 43extraembryonic component
  • 41penis
  • 37artery
  • 36thymus
  • 25adrenal gland
  • 24spleen
  • 23intestine
  • 23thyroid gland
  • 22embryo
  • 20vein
  • 18bone element
  • 17lymphatic vessel
  • 16bronchus
  • 13bone marrow
  • 11esophagus
  • 11placenta
  • 11prostate gland
  • 11stomach
  • 9bodily fluid
  • 6large intestine
  • 5skeleton
  • 5trachea
  • 5uterus
  • 4gonad
  • 4mouth
  • 4small intestine
  • 4spinal cord
  • 2ovary
  • 1limb
  • 1pericardium
  • 1testis
Project
  • 513AMP
  • 155KPMP
  • 127ENCODE
  • 20T1D
  • 7LungMap
Genome assembly (visualization)
  • 491hg19
  • 219GRCh38
Encyclopedia version
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE

822 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
caQTL
eQTL
primary cell
endothelial cell916722132
hepatocyte138311214
epithelial cell of proximal tubule16112111
glomerular endothelial cell1421211
endothelial cell of umbilical vein246512
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego