Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 13candidate regulatory elements
  • 11target gene predictions
  • 8chromatin state
  • 7binding sites
  • 5accessible chromatin
  • 1histone modifications
  • 1variant allelic effects
Date released
  • 21September, 2022
  • 12February, 2021
  • 6November, 2021
  • 2June, 2020
  • 2October, 2022
  • 1August, 2017
  • 1February, 2024
  • 1May, 2021
Available data
  • 39bed bed3+
  • 7bed bed9
  • 3bigWig
Organism
  • 46Homo sapiens
Collection Tags
  • 21EpiMap
  • 8ChIP-Atlas
  • 8ENCODE
  • 6AMP
  • 6T2DKP
  • 2DGA
Biosample type
  • 46primary cell
  • 36cell line
  • 3in vitro differentiated cells
  • 2tissue
Organ
  • 828epithelium
  • 309kidney
  • 293connective tissue
  • 172vasculature
  • 126pancreas
  • 114blood vessel
  • 100skin of body
  • 65liver
  • 50musculature of body
  • 46mammary gland
  • 41penis
  • 40extraembryonic component
  • 35brain
  • 34lung
  • 33heart
  • 29artery
  • 23eye
  • 23intestine
  • 22embryo
  • 20lymphatic vessel
  • 20vein
  • 16bronchus
  • 14bone element
  • 13bone marrow
  • 11adrenal gland
  • 11stomach
  • 10esophagus
  • 10placenta
  • 10prostate gland
  • 9blood
  • 9bodily fluid
  • 6large intestine
  • 5trachea
  • 5uterus
  • 4gonad
  • 4mouth
  • 4small intestine
  • 4spinal cord
  • 3thyroid gland
  • 2ovary
  • 1adipose tissue
  • 1limb
  • 1pericardium
  • 1testis
  • 1thymus
Project
  • 40AMP
  • 6ENCODE
Genome assembly (visualization)
  • 46hg19
  • 13GRCh38
BIOSAMPLE
TYPE

46 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
primary cell
mammary gland epithelial cell343111
mammary epithelial cell31141
fibroblast of mammary gland211211
myoepithelial cell of mammary gland422
luminal epithelial cell of mammary gland1312
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego