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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 188total RNA-seq
  • 184single cell RNA-seq
  • 2small RNA-seq
Assay category
  • 374Transcription
Date released
  • 76February, 2023
  • 56September, 2020
  • 55May, 2021
  • 48July, 2018
  • 43April, 2018
  • 33May, 2022
  • 27September, 2018
  • 12February, 2021
  • 5December, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2July, 2019
  • 2May, 2020
  • 2October, 2018
  • 2October, 2019
  • 1November, 2018
Available data
  • 248fastq
  • 192bigWig
  • 190bam
  • 190tsv
  • 52zippedFastqFolder
  • 2bed bed3+
  • 2csv
Organism
  • 374Homo sapiens
Biosample type
  • 1326tissue
  • 374primary cell
  • 138in vitro differentiated cells
  • 123cell line
  • 2stem cell
Organ
  • 158epithelium
  • 155pancreas
  • 9connective tissue
  • 5liver
  • 2kidney
  • 1adipose tissue
  • 1musculature of body
Project
  • 177HPAP
  • 146AMP
  • 51T1D
Genome assembly (visualization)
  • 192hg19
  • 190GRCh38
Lab
  • 177Klaus Kaestner, Upenn
  • 144AMP-T2D consortium
  • 53Kyle Gaulton, UCSD
Audit category:
  • 7inconsistent ontology term
replicates.library.nucleic_acid_term_name!
  • DNA
BIOSAMPLE
ASSAY

374 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
Langerhans cell85
pancreatic alpha cell5212
monocyte52
exocrine cell39
pancreatic beta cell2112
pancreatic acinar cell412
pancreatic ductal cell410
pancreatic delta cell11
pancreatic cell9
pancreatic polypeptide-secreting cell9
mesenchymal cell6
hepatocyte5
osteoblast4
pancreatic stellate cell4
CD8-positive, alpha-beta T cell2
co-expressing pancreatic endocrine cell2
endothelial cell2
enteroendocrine cell2
mast cell2
pancreatic epsilon cell2
unclassified exocrine cell2
unclassified pancreatic endocrine cell2
embryonic stem cell1
kidney glomerular epithelial cell1
kidney tubule cell1
mesenchymal stem cell of adipose1
naive thymus-derived CD4-positive, alpha-beta T cell1
neutrophil1
skeletal muscle satellite cell1
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