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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 188total RNA-seq
  • 184single cell RNA-seq
  • 2small RNA-seq
Assay category
  • 374Transcription
Date released
  • 76February, 2023
  • 56September, 2020
  • 55May, 2021
  • 48July, 2018
  • 43April, 2018
  • 33May, 2022
  • 27September, 2018
  • 12February, 2021
  • 5December, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2July, 2019
  • 2May, 2020
  • 2October, 2018
  • 2October, 2019
  • 1November, 2018
Available data
  • 248fastq
  • 192bigWig
  • 190bam
  • 190tsv
  • 52zippedFastqFolder
  • 2bed bed3+
  • 2csv
Organism
  • 374Homo sapiens
Biosample type
  • 1325tissue
  • 374primary cell
  • 138in vitro differentiated cells
  • 123cell line
  • 2stem cell
Organ
  • 158epithelium
  • 155pancreas
  • 9connective tissue
  • 5liver
  • 2kidney
  • 1adipose tissue
  • 1musculature of body
Project
  • 177HPAP
  • 146AMP
  • 51T1D
Genome assembly (visualization)
  • 192hg19
  • 190GRCh38
Lab
  • 177Klaus Kaestner, Upenn
  • 144AMP-T2D consortium
  • 53Kyle Gaulton, UCSD
Audit category:
  • 7inconsistent ontology term
replicates.library.nucleic_acid_term_name!
  • DNA
BIOSAMPLE
ASSAY

374 results

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total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
Langerhans cell85
pancreatic alpha cell5212
monocyte52
exocrine cell39
pancreatic beta cell2112
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