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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1118
target gene predictions
819
accessible chromatin
478
gene expression
472
differential activity
366
candidate regulatory elements
210
histone modifications
81
variant allelic effects
77
binding sites
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
456
February, 2021
333
November, 2021
327
September, 2022
320
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2024
37
January, 2022
33
July, 2025
21
January, 2020
19
April, 2020
16
February, 2020
13
May, 2022
9
August, 2018
9
November, 2022
8
October, 2022
5
March, 2020
5
October, 2019
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2709
bed bed3+
612
tsv
410
bigWig
108
txt
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3668
Homo sapiens
Collection Tags
543
ENCODE-rE2G
393
HDMA
376
DGA
373
AMP
358
T2DKP
330
T1D
320
EpiMap
320
pyxis
281
KPMP
216
ChIP-Atlas
185
ENCODE
184
BLUEPRINT
133
CATlas
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5440
tissue
3713
primary cell
2300
cell line
470
in vitro differentiated cells
3
stem cell
Organ
770
epithelium
466
blood
325
kidney
300
connective tissue
225
brain
202
heart
150
pancreas
150
skin of body
148
vasculature
133
liver
109
blood vessel
71
lung
64
eye
60
__MARKER__
58
musculature of body
52
adipose tissue
46
muscle organ
40
mammary gland
36
thymus
34
artery
34
extraembryonic component
33
penis
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
18
embryo
16
bone element
15
lymphatic vessel
14
bronchus
14
vein
11
bone marrow
11
stomach
10
esophagus
9
bodily fluid
9
placenta
9
prostate gland
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3017
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1662
GRCh38
1621
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
chromhmm
BIOSAMPLE
TYPE
3713 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
variant allelic effects
binding sites
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
macrophage
13
22
2
17
3
3
8
2
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