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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
958
target gene predictions
819
accessible chromatin
430
differential activity
210
histone modifications
206
candidate regulatory elements
197
chromatin state
100
binding sites
81
variant allelic effects
55
eQTL
23
caQTL
9
gene expression
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
334
February, 2021
333
November, 2021
320
May, 2026
188
May, 2021
167
September, 2022
114
February, 2024
110
September, 2023
86
May, 2020
56
January, 2021
53
June, 2020
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
23
January, 2020
19
April, 2020
17
August, 2021
9
November, 2022
7
October, 2019
6
August, 2017
4
February, 2023
2
January, 2025
2
November, 2020
1
June, 2021
1
March, 2020
Available data
2418
bed bed3+
410
bigWig
164
bed bed9
142
tsv
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3057
Homo sapiens
Collection Tags
543
ENCODE-rE2G
393
HDMA
359
T2DKP
357
AMP
320
pyxis
252
T1D
216
ChIP-Atlas
197
DGA
197
ENCODE
173
BLUEPRINT
160
EpiMap
133
CATlas
110
KPMP
68
T2DKP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
Biosample type
4919
tissue
3102
primary cell
2180
cell line
370
in vitro differentiated cells
4
stem cell
Organ
485
epithelium
466
blood
251
connective tissue
223
brain
195
heart
137
skin of body
128
kidney
118
liver
112
vasculature
96
pancreas
87
blood vessel
70
lung
62
eye
60
__MARKER__
52
musculature of body
51
adipose tissue
46
muscle organ
36
mammary gland
36
thymus
29
penis
28
artery
27
extraembryonic component
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
16
vein
14
bone element
14
embryo
12
bronchus
11
bone marrow
11
stomach
10
lymphatic vessel
9
bodily fluid
9
esophagus
9
placenta
7
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
skeleton
2
mouth
2
ovary
2
spinal cord
1
limb
1
testis
Project
2577
AMP
333
ENCODE
110
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1826
GRCh38
1509
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
r
BIOSAMPLE
TYPE
3102 results
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target gene predictions
accessible chromatin
differential activity
histone modifications
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
gene expression
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
25
1
3
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
30
7
1
T-cell
64
4
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