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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 122ChIP-seq
Assay category
  • 122DNA binding
Target of assay
  • 237histone
  • 237histone modification
  • 122broad histone mark
  • 115narrow histone mark
  • 35control
  • 10RNA binding protein
  • 10transcription factor
  • 1chromatin remodeller
Date released
  • 66May, 2021
  • 17September, 2018
  • 16August, 2017
  • 12October, 2019
  • 8June, 2019
  • 2May, 2019
  • 1August, 2021
Available data
  • 118bigWig
  • 112bed narrowPeak
  • 100bam
  • 51tagAlign
  • 33fastq
  • 21bigBed narrowPeak
  • 8bed broadPeak
  • 8bigBed broadPeak
  • 1bed bed3+
Organism
  • 122Homo sapiens
Biosample type
  • 303tissue
  • 122primary cell
  • 56in vitro differentiated cells
  • 19cell line
  • 1stem cell
Organ
  • 31epithelium
  • 27pancreas
  • 9blood vessel
  • 9vasculature
  • 9vein
  • 5kidney
  • 4connective tissue
  • 4musculature of body
  • 1liver
Project
  • 78AMP
  • 44T1D
Genome assembly (visualization)
  • 118hg19
  • 96GRCh38
Lab
  • 64Kyle Gaulton, UCSD
  • 58AMP-T2D consortium
Audit category:
  • 8inconsistent ontology term
Audit category:
  • 21missing controlled_by
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

122 results

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ChIP-seq
primary cell
monocyte44
CD8-positive, alpha-beta T cell20
pancreatic endocrine cell11
endothelial cell of umbilical vein9
pancreatic ductal cell6
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