Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
557
ChIP-seq
Assay category
557
DNA binding
Target of assay
558
histone modification
557
histone
296
narrow histone mark
261
broad histone mark
175
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
0
recombinant protein
Date released
168
October, 2019
123
August, 2017
89
May, 2019
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
464
bigWig
461
bed narrowPeak
408
bam
255
bigBed narrowPeak
130
tagAlign
73
fastq
29
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
551
Homo sapiens
Biosample type
557
tissue
primary cell
112
in vitro differentiated cells
46
cell line
2
stem cell
Organ
114
brain
95
heart
73
pancreas
69
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
555
AMP
2
T1D
Genome assembly (visualization)
436
GRCh38
431
hg19
Lab
522
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
month_released!
November, 2017
BIOSAMPLE
ASSAY
557 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
+ See 97 more…
See all biosamples
Download