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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
570
ChIP-seq
Assay category
570
DNA binding
Target of assay
571
histone modification
570
histone
303
narrow histone mark
267
broad histone mark
159
control
77
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
83
May, 2019
72
August, 2017
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
500
bigWig
498
bed narrowPeak
458
bam
305
bigBed narrowPeak
166
tagAlign
72
fastq
21
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
564
Homo sapiens
Biosample type
570
tissue
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
95
heart
73
pancreas
69
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
adipose tissue
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
568
AMP
2
T1D
Genome assembly (visualization)
487
GRCh38
416
hg19
Lab
535
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
organ_slims!
adipose tissue
musculature of body
BIOSAMPLE
ASSAY
570 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
left cardiac atrium
35
heart left ventricle
24
tibial nerve
24
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