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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
ChIP-seq
167
DNase-seq
8
total RNA-seq
2
ATAC-seq
Assay category
172
DNA binding
169
DNA accessibility
8
Transcription
Target of assay
145
histone
145
histone modification
106
narrow histone mark
39
broad histone mark
27
control
Date released
452
February, 2021
193
May, 2020
186
October, 2019
170
August, 2017
163
June, 2019
116
July, 2018
115
May, 2019
79
April, 2019
74
October, 2018
69
November, 2017
64
July, 2019
48
December, 2017
39
November, 2019
38
May, 2021
26
November, 2018
24
May, 2022
15
October, 2017
9
March, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
1
March, 2019
Available data
349
bam
323
bigWig
314
bed narrowPeak
210
bigBed narrowPeak
167
bed bed3+
167
bed broadPeak
167
bigBed broadPeak
49
tagAlign
8
tsv
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
349
Homo sapiens
Biosample type
349
tissue
86
primary cell
29
cell line
4
in vitro differentiated cells
Organ
108
brain
100
limb
72
kidney
42
nerve
34
heart
32
musculature of body
29
blood vessel
29
vasculature
28
artery
18
ureter
6
liver
4
pancreas
3
eye
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
349
AMP
Genome assembly (visualization)
322
GRCh38
306
hg19
Lab
349
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
biosample_type!
stem cell
BIOSAMPLE
ASSAY
349 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
35
2
4
1
tibial artery
23
2
1
heart
5
18
2
brain
5
12
1
kidney
4
13
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