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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
28
ChIP-seq
1
snATAC-seq
Assay category
177
DNA accessibility
28
DNA binding
Target of assay
13
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
163
June, 2019
26
August, 2017
9
November, 2018
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1907
bam
1772
bigWig
1076
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
205
Homo sapiens
Biosample type
205
tissue
37
primary cell
25
in vitro differentiated cells
3
cell line
stem cell
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
27
pancreas
18
ureter
6
adipose tissue
6
connective tissue
6
liver
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
spleen
Project
205
AMP
Genome assembly (visualization)
204
GRCh38
189
hg19
Lab
205
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
14
missing controlled_by
biosample_type!
stem cell
files.file_type!
hic
BIOSAMPLE
ASSAY
205 results
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Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
tissue
islet of Langerhans
21
heart
18
muscle of arm
17
brain
14
kidney
13
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