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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
6
single cell RNA-seq
2
ChIP-seq
1
snATAC-seq
Assay category
177
DNA accessibility
6
Transcription
2
DNA binding
Target of assay
2
control
Date released
163
June, 2019
August, 2017
9
November, 2018
6
February, 2021
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1737
bam
1594
bigWig
987
tsv
918
bed narrowPeak
539
bigBed narrowPeak
202
fastq
187
bed broadPeak
179
bed bed3+
179
tagAlign
176
bigBed broadPeak
157
txt
64
xls
20
bed bedMethyl
20
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
185
Homo sapiens
Biosample type
185
tissue
39
primary cell
18
in vitro differentiated cells
3
cell line
stem cell
Organ
73
kidney
36
limb
33
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
185
AMP
Genome assembly (visualization)
178
GRCh38
163
hg19
Lab
185
AMP-T2D consortium
Audit category:
6
audit script error
1
inconsistent ontology term
biosample_type!
stem cell
month_released!
August, 2017
BIOSAMPLE
ASSAY
185 results
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DNase-seq
single cell RNA-seq
ChIP-seq
snATAC-seq
tissue
heart
18
kidney
13
5
muscle of arm
17
brain
14
muscle of leg
13
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