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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
DNase-seq
28
ChIP-seq
Assay category
144
DNA accessibility
28
DNA binding
Target of assay
13
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
131
June, 2019
26
August, 2017
9
November, 2018
4
October, 2019
2
September, 2017
Available data
1863
bam
1715
bigWig
1069
tsv
933
bed narrowPeak
523
bigBed narrowPeak
375
fastq
223
tagAlign
172
bed bed3+
168
bed broadPeak
156
txt
144
bigBed broadPeak
64
xls
22
bed bedMethyl
22
bigBed bedMethyl
9
hic
8
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
172
Homo sapiens
Biosample type
172
tissue
36
primary cell
25
in vitro differentiated cells
3
cell line
stem cell
Organ
68
kidney
36
limb
musculature of body
27
brain
27
heart
27
pancreas
18
ureter
6
adipose tissue
6
connective tissue
6
liver
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
spleen
Project
172
AMP
Genome assembly (visualization)
172
GRCh38
156
hg19
Lab
172
AMP-T2D consortium
Audit category:
14
missing controlled_by
biosample_type!
stem cell
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
172 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
islet of Langerhans
21
heart
18
brain
14
kidney
13
renal cortex interstitium
11
+ See 37 more…
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