Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
14
ATAC-seq
14
total RNA-seq
4
pCHi-C
1
Hi-C
Assay category
23
DNA binding
14
DNA accessibility
14
Transcription
1
3D chromatin structure
Target of assay
23
histone
23
histone modification
23
narrow histone mark
Date released
229
August, 2021
114
August, 2017
87
February, 2023
56
October, 2019
47
September, 2023
42
May, 2022
40
May, 2024
31
March, 2020
25
February, 2020
19
April, 2020
15
May, 2023
13
July, 2019
13
November, 2017
9
February, 2021
8
January, 2021
8
October, 2017
4
July, 2018
4
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
2
May, 2021
1
April, 2019
1
August, 2022
1
November, 2019
Available data
bam
160
bigWig
151
bed narrowPeak
49
tagAlign
47
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
56
Homo sapiens
Biosample type
56
tissue
4
in vitro differentiated cells
3
primary cell
1
cell line
Organ
21
eye
4
gonad
4
ovary
3
brain
3
pancreas
2
connective tissue
1
adipose tissue
1
heart
1
limb
1
lymph node
1
pituitary gland
1
skin of body
Project
56
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
56
AMP-T2D consortium
files.file_type!
bam
organ_slims!
bone element
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
13
14
4
adipose tissue
1
dorsal plus ventral thalamus
1
heart
1
planum polare
1
Download