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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
581
ChIP-seq
Assay category
581
DNA binding
Target of assay
581
histone modification
580
histone
303
narrow histone mark
277
broad histone mark
183
control
81
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
89
May, 2019
86
August, 2017
64
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
9
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
516
bigWig
514
bed narrowPeak
460
bam
306
bigBed narrowPeak
180
tagAlign
68
fastq
bed broadPeak
bed bed3+
1
tagAlign bed3+
Organism
581
Homo sapiens
Biosample type
581
tissue
218
primary cell
104
in vitro differentiated cells
24
cell line
Organ
175
brain
95
heart
70
liver
54
blood vessel
54
vasculature
49
limb
49
pancreas
32
connective tissue
31
adipose tissue
24
nerve
20
artery
20
kidney
12
musculature of body
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
579
AMP
2
T1D
Genome assembly (visualization)
468
GRCh38
391
hg19
Lab
546
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bed bed3+
bed broadPeak
BIOSAMPLE
ASSAY
581 results
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Clear Filters
ChIP-seq
tissue
liver
65
left cardiac atrium
35
islet of Langerhans
33
subcutaneous abdominal adipose tissue
30
heart left ventricle
24
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