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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
615
ChIP-seq
Assay category
615
DNA binding
Target of assay
616
histone modification
615
histone
318
narrow histone mark
297
broad histone mark
control
81
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
111
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
521
bigWig
519
bed narrowPeak
465
bam
312
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
bed bed3+
1
tagAlign bed3+
Organism
609
Homo sapiens
Biosample type
615
tissue
234
primary cell
104
in vitro differentiated cells
38
cell line
Organ
184
brain
95
heart
69
liver
61
pancreas
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
613
AMP
2
T1D
Genome assembly (visualization)
481
GRCh38
425
hg19
Lab
580
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
files.file_type!
bed bed3+
target.investigated_as!
control
BIOSAMPLE
ASSAY
615 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
39
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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