Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
517
target gene predictions
157
accessible chromatin
115
eQTL
92
gene expression
89
histone modifications
74
Fine-mapped variants
48
variant allelic effects
36
binding sites
25
chromatin state
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
918
September, 2022
641
February, 2021
104
March, 2020
63
June, 2020
January, 2020
57
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
27
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
9
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1809
bed bed3+
bed bed9
194
tsv
80
bigWig
27
bigBed bed9
1
bam
Organism
2105
Homo sapiens
Biosample type
2243
primary cell
2163
cell line
2107
tissue
427
in vitro differentiated cells
4
stem cell
Organ
278
brain
237
musculature of body
234
kidney
181
intestine
180
limb
160
heart
138
lung
105
large intestine
100
pancreas
85
stomach
83
connective tissue
75
extraembryonic component
72
adipose tissue
64
eye
63
blood vessel
63
vasculature
61
small intestine
57
epithelium
49
liver
48
adrenal gland
48
ureter
46
placenta
37
thymus
32
artery
32
gonad
29
esophagus
28
embryo
28
spinal cord
28
spleen
22
skin of body
20
nerve
19
bone element
17
ovary
16
thyroid gland
15
skeleton
15
testis
14
lymphoid tissue
13
prostate gland
12
uterus
11
breast
9
mouth
8
tongue
8
urinary bladder
8
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
vein
Project
2102
AMP
5
ITG
Genome assembly (visualization)
1931
hg19
209
GRCh38
3
hg18
files.file_type!
bed bed9
bed bed9+
month_released!
January, 2020
organ_slims!
vein
BIOSAMPLE
TYPE
2107 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
chromatin state
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
3
3
1
2
1
stomach
40
21
3
1
1
1
kidney
29
14
8
1
7
2
1
1
brain
29
16
1
2
1
3
1
1
lung
33
17
1
1
+ See 259 more…
See all biosamples
Download