Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
911
candidate regulatory elements
501
target gene predictions
193
accessible chromatin
113
eQTL
108
gene expression
87
histone modifications
71
Fine-mapped variants
46
variant allelic effects
34
binding sites
25
chromatin state
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
890
September, 2022
625
February, 2021
100
March, 2020
61
June, 2020
57
January, 2020
55
January, 2022
54
May, 2020
46
August, 2021
45
February, 2020
30
May, 2021
28
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
8
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1797
bed bed3+
bed bed9
206
tsv
118
bigWig
30
bigBed bed9
1
bam
Organism
2104
Homo sapiens
Biosample type
2271
primary cell
2162
cell line
2106
tissue
424
in vitro differentiated cells
4
stem cell
Organ
298
brain
241
musculature of body
240
kidney
187
limb
181
intestine
171
heart
138
lung
105
large intestine
104
pancreas
87
connective tissue
85
stomach
76
adipose tissue
75
extraembryonic component
68
blood vessel
68
vasculature
65
eye
61
small intestine
57
epithelium
51
ureter
50
liver
48
adrenal gland
46
placenta
thymus
36
artery
32
gonad
29
esophagus
29
spinal cord
28
embryo
28
spleen
22
skin of body
nerve
19
bone element
17
ovary
16
thyroid gland
15
skeleton
15
testis
14
lymphoid tissue
13
prostate gland
12
uterus
11
breast
9
mouth
8
tongue
8
urinary bladder
8
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
penis
1
vein
Project
2101
AMP
5
ITG
Genome assembly (visualization)
1915
hg19
241
GRCh38
3
hg18
files.file_type!
bed bed9
organ_slims!
nerve
penis
thymus
BIOSAMPLE
TYPE
2106 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
chromatin state
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
5
3
1
2
1
stomach
40
21
3
1
1
1
kidney
29
14
10
1
7
2
1
1
brain
29
16
2
2
1
3
1
1
lung
33
17
1
1
+ See 258 more…
See all biosamples
Download