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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
254
ChIP-seq
2
MeRIP-seq
Assay category
254
DNA binding
Target of assay
444
histone modification
443
histone
233
broad histone mark
210
narrow histone mark
162
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
52
August, 2017
44
October, 2018
43
December, 2017
23
May, 2019
23
May, 2020
20
April, 2019
20
October, 2019
10
November, 2018
7
December, 2018
6
September, 2017
5
May, 2024
2
November, 2020
1
January, 2019
Available data
232
bam
144
fastq
93
bigWig
75
bed narrowPeak
65
bigBed narrowPeak
33
tagAlign
16
bed bed3+
Organism
255
Homo sapiens
Biosample type
444
cell line
256
tissue
86
in vitro differentiated cells
36
primary cell
1
stem cell
Organ
85
liver
46
pancreas
41
adipose tissue
41
connective tissue
28
heart
brain
19
blood vessel
19
vasculature
17
limb
14
spleen
11
nerve
8
artery
7
kidney
4
musculature of body
Project
256
AMP
Genome assembly (visualization)
96
GRCh38
91
hg19
Lab
249
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
files.file_type!
bed bedMethyl
organ_slims!
brain
BIOSAMPLE
ASSAY
256 results
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ChIP-seq
MeRIP-seq
tissue
liver
80
islet of Langerhans
20
2
body of pancreas
18
spleen
14
subcutaneous adipose tissue
12
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