Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
592
ChIP-seq
Assay category
592
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
97
August, 2017
89
May, 2019
64
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
9
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
521
bigWig
519
bed narrowPeak
465
bam
312
bigBed narrowPeak
186
tagAlign
73
fastq
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
592
Homo sapiens
Biosample type
592
tissue
221
primary cell
112
in vitro differentiated cells
24
cell line
2
stem cell
Organ
175
brain
95
heart
69
liver
61
pancreas
54
blood vessel
54
vasculature
49
limb
32
connective tissue
31
adipose tissue
24
nerve
20
artery
20
kidney
12
musculature of body
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
590
AMP
2
T1D
Genome assembly (visualization)
479
GRCh38
402
hg19
Lab
557
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
6
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bed broadPeak
bedpe bed3+
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
592 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
45
left cardiac atrium
35
subcutaneous abdominal adipose tissue
30
heart left ventricle
24
+ See 100 more…
See all biosamples
Download