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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
7
total RNA-seq
4
Hi-C
2
ATAC-seq
1
WGBS
Assay category
59
DNA binding
7
Transcription
4
3D chromatin structure
2
DNA accessibility
1
DNA methylation
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
65
October, 2019
May, 2019
5
July, 2019
3
February, 2020
Available data
101
bam
85
bigWig
80
bed narrowPeak
78
bigBed narrowPeak
36
bed bed3+
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
73
Homo sapiens
Biosample type
73
tissue
Organ
544
connective tissue
485
adipose tissue
483
pancreas
358
liver
265
heart
231
kidney
201
brain
bone element
79
limb
78
blood vessel
78
vasculature
64
artery
53
eye
41
nerve
30
musculature of body
24
spleen
20
lung
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
73
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
73
AMP-T2D consortium
files.file_type!
bed broadPeak
month_released!
May, 2019
organ_slims!
bone element
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
total RNA-seq
Hi-C
ATAC-seq
WGBS
tissue
tibial nerve
35
5
1
tibial artery
23
1
1
gastrocnemius medialis
1
4
islet of Langerhans
1
muscle of leg
1
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